Index

A

algo (clustergraph.clustergraph.ClusterGraph attribute) associate_cluster_one_compo() (clustergraph.Metric_distortion_class.Metric_distortion method)

associate_clusters_compo() (clustergraph.Metric_distortion_class.Metric_distortion method) average_dist() (in module clustergraph.distances)

B

BF_edge_choice() (clustergraph.ConnectivityPruning.ConnectivityPruning method)

C

centroid_dist() (in module clustergraph.distances) ClusterGraph (class in clustergraph.clustergraph) clustergraph.c_GraphPreprocess module clustergraph.clustergraph module clustergraph.ConnectivityPruning module clustergraph.distances module clustergraph.EdgeStrategy module clustergraph.GraphPruning module clustergraph.Metric_distortion_class module

clustergraph.NodeStrategy module clustergraph.plot_graph module clustergraph.subsampling module clustergraph.utils module clusters (clustergraph.clustergraph.ClusterGraph attribute) (clustergraph.subsampling.Subsampling attribute) color_graph() (clustergraph.c_GraphPreprocess.GraphPreprocess method) conn_prune_merged_graph() (clustergraph.Metric_distortion_class.Metric_distortion method) connectivity_graph() (clustergraph.ConnectivityPruning.ConnectivityPruning method) (clustergraph.Metric_distortion_class.Metric_distortion method) ConnectivityPruning (class in clustergraph.ConnectivityPruning) create_knn_graph_merge_compo_CG() (clustergraph.Metric_distortion_class.Metric_distortion method)

D

data_transformation() (clustergraph.subsampling.Subsampling method) dict_new_old_indices (clustergraph.subsampling.Subsampling attribute) dict_old_new_indices (clustergraph.subsampling.Subsampling attribute) dictLabelToHexa() (clustergraph.EdgeStrategy.EdgeStrategy method)

dist_weight (clustergraph.clustergraph.ClusterGraph attribute) distortion_graph_no_weight() (clustergraph.Metric_distortion_class.Metric_distortion method) distortion_graph_weight() (clustergraph.Metric_distortion_class.Metric_distortion method) draw_graph() (in module clustergraph.plot_graph) draw_graph_pie() (in module clustergraph.plot_graph)

E

edgeColHexa_dictEdgeHexa() (clustergraph.EdgeStrategy.EdgeStrategy method) edgeColHexa_dictLabHexa() (clustergraph.EdgeStrategy.EdgeStrategy method) edgeColHexa_listHexa() (clustergraph.EdgeStrategy.EdgeStrategy method)

EdgeStrategy (class in clustergraph.EdgeStrategy) EMD_for_two_clusters() (in module clustergraph.distances) expo_size() (clustergraph.NodeStrategy.NodeStrategy method)

F

fit_edges() (clustergraph.c_GraphPreprocess.GraphPreprocess method) (clustergraph.EdgeStrategy.EdgeStrategy method)

fit_nodes() (clustergraph.c_GraphPreprocess.GraphPreprocess method) (clustergraph.NodeStrategy.NodeStrategy method)

G

get_clusters_from_BM() (in module clustergraph.utils) get_clusters_from_graph() (clustergraph.subsampling.Subsampling method) get_clusters_from_Mapper() (in module clustergraph.utils) get_clusters_from_scikit() (in module clustergraph.utils) get_color_edge_unique() (clustergraph.EdgeStrategy.EdgeStrategy method) get_color_node_points_covered() (clustergraph.NodeStrategy.NodeStrategy method) get_color_node_unique() (clustergraph.NodeStrategy.NodeStrategy method) get_color_var_exp() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method) get_color_var_lin() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method) get_color_var_log() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method) get_corresponding_edges() (in module clustergraph.utils) get_distance_matrix_ccompo() (clustergraph.Metric_distortion_class.Metric_distortion method) get_graph() (clustergraph.clustergraph.ClusterGraph method) get_graph_prepro() (clustergraph.c_GraphPreprocess.GraphPreprocess method) get_labels() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method)

get_labels_into_hexa() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method) get_merged_graph() (clustergraph.GraphPruning.GraphPruning method) get_mini_maxi() (clustergraph.EdgeStrategy.EdgeStrategy method) (clustergraph.NodeStrategy.NodeStrategy method) get_set_val_var_edge() (clustergraph.EdgeStrategy.EdgeStrategy method) get_sorted_edges() (in module clustergraph.utils) get_val_var_edge_graph() (clustergraph.EdgeStrategy.EdgeStrategy method) get_val_var_node_graph() (clustergraph.NodeStrategy.NodeStrategy method) get_val_var_node_Xnum() (clustergraph.NodeStrategy.NodeStrategy method) get_val_var_node_Xpand() (clustergraph.NodeStrategy.NodeStrategy method) get_values() (in module clustergraph.utils) getDictLabelHexaIdentity() (clustergraph.EdgeStrategy.EdgeStrategy method) Graph (clustergraph.clustergraph.ClusterGraph attribute) GraphPreprocess (class in clustergraph.c_GraphPreprocess) GraphPruning (class in clustergraph.GraphPruning) greedy_pruning() (clustergraph.Metric_distortion_class.Metric_distortion method)

I

id_size() (clustergraph.NodeStrategy.NodeStrategy method) identity_weight() (clustergraph.EdgeStrategy.EdgeStrategy method) insert_sorted_list() (in module clustergraph.utils)

intr_two_clusters() (clustergraph.Metric_distortion_class.Metric_distortion method) intr_two_points() (clustergraph.Metric_distortion_class.Metric_distortion method) intrin_dist_cg() (clustergraph.Metric_distortion_class.Metric_distortion method) is_knn_computed (clustergraph.clustergraph.ClusterGraph attribute)

K

k_compo (clustergraph.clustergraph.ClusterGraph attribute)

knn_g (clustergraph.clustergraph.ClusterGraph attribute)

L

linear_size() (clustergraph.NodeStrategy.NodeStrategy method)

listLabelToHexa() (clustergraph.EdgeStrategy.EdgeStrategy method) log_size() (clustergraph.NodeStrategy.NodeStrategy method)

M

max_dist() (in module clustergraph.distances) max_size_node_graph() (in module clustergraph.utils) merge_components() (clustergraph.Metric_distortion_class.Metric_distortion method) merge_graph() (clustergraph.GraphPruning.GraphPruning method) merge_graph_draft() (clustergraph.GraphPruning.GraphPruning method) metric_clusters (clustergraph.clustergraph.ClusterGraph attribute) Metric_distortion (class in clustergraph.Metric_distortion_class) metric_points (clustergraph.clustergraph.ClusterGraph attribute) min_dist() (in module clustergraph.distances) module clustergraph.c_GraphPreprocess clustergraph.clustergraph clustergraph.ConnectivityPruning clustergraph.distances clustergraph.EdgeStrategy clustergraph.GraphPruning clustergraph.Metric_distortion_class clustergraph.NodeStrategy clustergraph.plot_graph clustergraph.subsampling clustergraph.utils

N

NodeStrategy (class in clustergraph.NodeStrategy) normalize_exp_min_max() (clustergraph.EdgeStrategy.EdgeStrategy method)

normalize_lin_min_max() (clustergraph.EdgeStrategy.EdgeStrategy method) normalize_log_min_max() (clustergraph.EdgeStrategy.EdgeStrategy method) normalize_max() (clustergraph.EdgeStrategy.EdgeStrategy method)

O

original_graph (clustergraph.clustergraph.ClusterGraph attribute)

P

parameters_metric_points (clustergraph.clustergraph.ClusterGraph attribute) perc (clustergraph.subsampling.Subsampling attribute) plot_slider_graph() (in module clustergraph.plot_graph) plt_conn_prune_computed() (clustergraph.Metric_distortion_class.Metric_distortion method) plt_md_prune_computed() (clustergraph.Metric_distortion_class.Metric_distortion method) prune() (clustergraph.GraphPruning.GraphPruning method)

prune_conn() (clustergraph.GraphPruning.GraphPruning method) prune_distortion() (clustergraph.clustergraph.ClusterGraph method) prune_distortion_pr() (clustergraph.GraphPruning.GraphPruning method) prune_edges_BF() (clustergraph.Metric_distortion_class.Metric_distortion method) prune_edges_PS() (clustergraph.Metric_distortion_class.Metric_distortion method) PS_edge_choice() (clustergraph.ConnectivityPruning.ConnectivityPruning method)

R

remove_edges() (clustergraph.Metric_distortion_class.Metric_distortion method)

replace_in_array() (in module clustergraph.utils)

S

set_color_edges_labels() (clustergraph.EdgeStrategy.EdgeStrategy method) set_color_edges_variable() (clustergraph.EdgeStrategy.EdgeStrategy method) set_color_nodes_labels() (clustergraph.NodeStrategy.NodeStrategy method) set_color_nodes_variable() (clustergraph.NodeStrategy.NodeStrategy method) set_distortion_edges() (clustergraph.Metric_distortion_class.Metric_distortion method)

set_min_max_mean_var() (clustergraph.EdgeStrategy.EdgeStrategy method) set_size_nodes() (clustergraph.NodeStrategy.NodeStrategy method) set_weight_edges() (clustergraph.EdgeStrategy.EdgeStrategy method) subsampled_clusters (clustergraph.subsampling.Subsampling attribute) Subsampling (class in clustergraph.subsampling) subsampling_clusters() (clustergraph.subsampling.Subsampling method)

T

type_pruning (clustergraph.clustergraph.ClusterGraph attribute)

W

weight (clustergraph.clustergraph.ClusterGraph attribute)

weight_knn_g (clustergraph.clustergraph.ClusterGraph attribute)

X

X (clustergraph.clustergraph.ClusterGraph attribute)

X_restricted (clustergraph.subsampling.Subsampling attribute)